PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_28368-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 546aa    MW: 59360.9 Da    PI: 6.9699
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_28368-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.8e-10248289341
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                      + k+ rr+++NReAAr+sR+RKka+i++Le    k ++Le+e
  TRIUR3_28368-P1 248 KEKVMRRLAQNREAARKSRLRKKAYIQQLESsriKLAQLEQE 289
                      56899************************9722244444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.0E-8244294No hitNo description
SMARTSM003385.0E-6246306IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.22248292IPR004827Basic-leucine zipper domain
PfamPF001705.1E-7249289IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.63E-7250294No hitNo description
CDDcd147081.22E-20250296No hitNo description
PROSITE patternPS000360253268IPR004827Basic-leucine zipper domain
PfamPF141441.0E-25349424IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    Send to blast
MELYPGYLED HFNIHKLSRR NPLPEKGFPA PNLHFAPHAT VAVFRTGGAS RIGASPVRAM  60
SLASGKAASS GSRVDSARAD DTARHDEAGH GSVAEFFVKM VRGALGEDEE KGGALCVMAN  120
QEDEEKGGAL CASPTHPSHS QEMSRRSGTG GASPPEYMSS AAAAQYAPAP LRMAMYERAP  180
PPQQHQQPQL QPALGMWSSE PYKVDSGGQA TSGSSIMEPD AKFDHAGLDE DPHMDELETA  240
DQGASKPKEK VMRRLAQNRE AARKSRLRKK AYIQQLESSR IKLAQLEQEL QRTRQQQGMY  300
GGNPGTSLHR GGSAGHLGFA AAGQMMDPGV AAFEIAYGHW VDDQKRNTEE LRSALQPGQG  360
TSELELEVMV QTGLANYDNL FRIKGAAAQA DVFCVMSGLW RSPAERFFLW IGGFRPSEVL  420
KILSPQLQPM SEPQSVAVYA LQLTSAQAED ALSQGMQKLQ QTLAESLTDP FAAPDAYMVG  480
AVEKLKGLVG FVQQADHLRQ ETLQNMHRIL TTRQAAKGLL VLGDYFQRLR ALSTLWAARP  540
RESAIS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00502DAPTransfer from AT5G10030Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ5964140.0KJ596414.1 Triticum aestivum transcription factor TGA4 (TGA4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003580646.11e-173PREDICTED: transcription factor TGA4-like
SwissprotQ391621e-114TGA4_ARATH; Transcription factor TGA4
TrEMBLM7Y8K70.0M7Y8K7_TRIUA; Transcription factor TGA4
STRINGMLOC_61530.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-106TGACG motif-binding factor 4